At2g01860.1/MSA

>gi|42568870|ref|NP_178295.2|	  486 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] -MILHCPVSLSLSFHLNLR--TSRIG-- ---NIGVTRVNASQRNHSKK LTKNLRNPRRTKLPPDFGVNLFLR KPKIEPLVIDDDDEQVQESVNDDDDAVVWEPEEIEAISSLFQKR--IPQKPDKPSRVRPL PLP-QPHKL-RPLGLPTPKKNIIRSPAL--SSV--- -SK-QV-- YKDPSFLIGLAREIKSLPSSDADVSLVLNKWV--SF L-RKGSLSTTIRELGHM--GL-PERALQT-YHWAEKH--SHLVPDNRILASTIQV- LAKHHE---LKL--LKFD--NSLASKNVIEAMIKGCIEGGWLNL ARKLILIS-K-SN-N-RILDSSVYVKMILEIAKNPDKYHLVVALLEELKKREDLKLSQQD CTSIMKICVKLGEFE--LVE-SLFDWF-KASN-REPSVVMYTTMIHSRYSEQKYREAMSV VWEMEE-SNCLLDLPAYRVVIKLFVA-LDDLGRAMRYYS-KLKEAGFSPTYDIYRDMISV YTASGRLTKCKEICKEVEDA---GL-RLDKDTSFRLLQL-

EKQTMSLLH >gi|21553611|gb|AAM62704.1|	  463 residues, 50 /line  unknown [Arabidopsis thaliana] ---MGKVPSSFRSIPAN-LLVR-K TTPSPPAPP---RDFRNRTAVGGDSAKLP--- HNTQAPRE -PSLRNPF--KSPNLS --DAKSLFNSIA-ATS RIPLDL-- KFHNSVLQSYASIAV--VDDTVKFFQHIMKS--QPN--FR P-GRSTFLILLSHACRAPDSS-ISNVHRV-LNLMVNN--G-LEPDQVTTDIAVRS- LCETGR---VDE--AKDLMK--EL---TEK--HSPPDTYTYNFLLKHLCKCKDLHV VYEFVDEM-R-DDFD-VKPDLVSFTILI -DNVCNSKNLR--EAM-YLVSKL-GNAG-FKPDCFLYNTIMKGFCTLSKGSEAVGV YKKMKE-EGVEPDQITYNTLIFGLSK-AGRVEEARMYLK-TMVDAGYEPDTATYTSLMNG MCRKGESLGALSLLEEMEAR---GC-APNDCTYNTLLHGL --CKARLMDKGM-ELYEMMKS-SG--VKLESNGYATLVRSLVKSGKVAEAYE VFDYAV---DS-KSLSD--- ---ASAYSTLETTLKWLKKAKE--

QGLVP >gi|21617993|gb|AAM67043.1|	  394 residues, 50 /line  unknown [Arabidopsis thaliana] ---MSSLSRFLLRGNFSFSTPTN-

-RRFFSAVTAAAATPSPP-- KPSLITLVNDERDPK- --FITEKFKKACQAEW FRK-NI-- AVYERTVRRLAAAKK--FEWVEEILEEQNKYP--NM S-KEGFVARIINLYGRV--GM-FENAQKV-FDEMPER--N-CKRT--- -VLSFNALLNACVNSKKFDL VEGIFEEL-PGKL-S-IEPDVASYNTLI -KGLCGKGSFT--EAV-ALIDEI-ENKG-LKPDHITFNILLHESYTKGKFEEGEQI WARMVE-KNVKRDIRSYNARLLGLAM-ENKSEEMVSLFD-KLKGNELKPDVFTFTAMIKG FVSEGKLDEAITWYKEIEKN---GC-RPLKFVFNSLLPAI --CKAGDLESAY-ELCKEIFA-KR--LLVDEAVLQEVVDALVKGSKQDEAEE IVE-

-LAKTNDYLQCKLR-LFPK-

E >gi|30689969|ref|NP_197945.2|	  574 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] MEDVNQEKKKVPPMSEPERSTP-- IKTTGGQYRFCKSCVE GSSCRT-- VRSRTKLMNVLI--ERGRPH --EAQTVFKTLA-ETG HRP-SL-- ISYTTLLAAMTVQKQ--YGSISSIVSEVEQSG--TK L-DSIFFNAVINAFSES--GN-MEDAVQA-LLKMKEL--G-LNPTTSTYNTLIKG- YGIAGK---PER--SSELLD--LMLEEGNV--DVGPNIRTFNVLVQAWCKKKKVEE AWEVVKKM-E-EC-G-VRPDTVTYNTIA -TCYVQKGETV--RAESEVVEKMVMKEK-AKPNGRTCGIVVGGYCREGRVRDGLRF VRRMKE-MRVEANLVVFNSLINGFVE-VMDRDGIDEVLT-LMKECNVKADVITYSTVMNA WSSAGYMEKAAQVFKEMVKA---GV-KPDAHAYSILAKGY --VRAKEPKKAE-ELLETLIV-ES---RPNVVIFTTVISGWCSNGSMDDAMR VFNKMC---KF-GVSPN--- ---IKTFETLMWGYLEVKQPWKAEEVLQM--MRGCGVKPEN--- -STFLLLAEAWRVAGLTDESNKAINALKCKDIEIAKLEKLYQKQ SSGSSFNLLQIPVGK-

-RELPTAKAMNLSACKLGARVPIICQKQSQAQFGI-SGQF VHSCTVFLS >gi|30697337|ref|NP_849849.1|	  544 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] ---MASALRRLVEQQQWRYLVSQSTRSPKLIHGFFS ---FSSKTNPNPNKQQ-QILIDY-ISKSLQSNDTWETLST K--FSSI- -DLSDSLIETILLRFK--NPETAK --QALSFFHWSSHTRN LRH-GIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLDTYE-ISS- -STPLVFDLLVQCYAKIRY--LELGFDVFKRLCDCG--FT L-SVITLNTLIHYSSKS--KI-DDLVWRI-YECAIDK--R-IYPNEITIRIMIQV- LCKEGR---LKE--VVDLLD--RI---CGK--RCLPSVIVNTSLVFRVLEEMRIEE SMSLLKRL-L-MK-N-MVVDTIGYSIVV -YAKAKEGDLV--SAR-KVFDEM-LQRG-FSANSFVYTVFVRVCCEKGDVKEAERL LSEMEE-SGVSPYDETFNCLIGGFAR-FGWEEKGLEYCE-VMVTRGLMPSCSAFNEMVKS VSKIENVNRANEILTKSIDK---GF-VPDEHTYSHLIRGF --IEGNDIDQAL-KLFYEMEY-RK--MSPGFEVFRSLIVGLCTCGKVEAGEK YLKIMK---KR-LIEPN--- ---ADIYDALIKAFQKIGDKTNADRVYNE--MISV-

R >gi|3395430|gb|AAC28762.1|	  453 residues, 50 /line  hypothetical protein [Arabidopsis thaliana] --MARSSSWHRMSNFMRKYRKIPHSSFKTK--

WNENLKQKYAMEELRS NLLT--DSENAS --VMRTLLSSFQ-LHN CEP-TP-- QAYRFVIKTLAKSSQ--LENISSVLYHLEV---SEK--FD T-PESIFRDVIAAYGFS--GR-IEEAIEV-FFKIPNF--R-CVPSAYTLNALLLV- LVRKRQ--SLEL--VPEILV--KA---CRM--GVRLEESTFGILIDALCRIGEVDC ATELVRYM-S-QD-S-VIVDPRLYSRLL -SSVCKHKDSSCFDVI-GYLEDL-RKTR-FSPGLRDYTVVMRFLVEGGRGKEVVSV LNQMKC-DRVEPDLVCYTIVLQGVIA-DEDYPKADKLFD-ELLLLGLAPDVYTYNVYING LCKQNDIEGALKMMSSMNKL---GS-EPNVVTYNILIKAL --VKAGDLSRAK-TLWKEMET-NG--VNRNSHTFDIMISAYIEVDEVVCAHG LLEEAF---NM-NVFVK--- ---SSRIEEVISRLCEKGLMDQAVELLAH--LV---

- >gi|473874|gb|AAA17740.1|	  435 residues, 50 /line  a membrane-associated salt-inducible protein

MLINGFIYL--KD-WANAFAI-FEDVIRD--G-LKPDVVLYNNIIRA- FCGMGN---MDR--ALRIVE--QM---KKE--RHRPTSRTFMPIIHAFAKAGAIRK ALDVFDMM-R-RS-G-CIPTVQTYNALI -LGLVEKRQMD--KAV-EVVDEM-LLAG-IRPNERTYTTIMDGYASLGDTGKAFEY FSRIKD-EGLELDVYTYEALLKACCK-SGRIESALAVTK-EMNAKNIPRNTFVYNILIDG WARRSDVWEAADLMQQMRQE---GV-QPDIHTYTSFVNAC --CKAGDMQKAM-NTIQEMKR-VG--LNPMLKPI-PLSYTVGHASLPEKALK CFEEMK---KS-GLKPD--- ---KAVYHCLMTSLLSRATVAEDYIITGIHRVCEEMVESGLTVDMGTAVHWSRCLRKIER TGGDITEALQKTFPPDWNSHRNLNAASYDTGNN---

-EGLNDRVTTMVLCMRLTVTATVTMIQMP--- -PRCNQKVA >gi|53749325|gb|AAU90184.1|	  395 residues, 50 /line  unkonwn protein [Oryza sativa (japonica cultivar-group)] ---MESVLARLPSSLRPREP

-LLCRVISAYGRARL--PAAARRAFAH-PAFP--AP R-TARALNTLLHALLAC--R---APLPEL-LSECRGS--G-IHPDACTYNILMRAA VADSGS---VDN--ACLLFD--EM---LQR--GIAPTVVTFGTLVTAFCEAGRLEE AFKVKEVM-SLQY-N-IRPNAHVYASLM -KALCEKGKVD--DAH-RLKEEM-VSNSEPLVDSGAYATLARALFRLGKKGEVVSL LEEMKE-KGIKVGREVHNSMIAGFCEDEGDLDAAFAALD-DMQKGGCKPDSVSYNTLVGG LCKMGRWRDASELVEDMPRR---GC-RPDVVTYRRLFDGI --CDAGGFSEAR-RVFNEMVF-KG--FAPSKDGVRKFVAWIEREGDAASLES VLCQLA---SV-NALES--- ---SEWEKAM-SGVLHDPAEQKIVKL--

--LDNLSLA >gi|54695176|dbj|BAD67153.1|	  563 residues, 50 /line  PPR566-6 [Physcomitrella patens] TLSISHLFSR--PLAVSQLQCRCCSRDR APVRGHLRKGKAITVEMLRALPAAAAHSRVQEPLFAGFDFEERAFREFKQTVSCCNC--- RTNFGRCGSSLSVVWVGMAERDVEATRFSSRGLGFWVRRGLWRRRCFAESDSFGELEDVS PVSLEGVSLAELLAQVGASEGRDESGLV-QIESNPHPSLLRRYR--ELDKPF--ERGRSL PIP-MPHKLNRPIPMPPSRRSFLPHGPV--PSTAVRRDVGPSLS TKS-DT-- LSYPRLLSKILVVSD--D--EVRMVLELWKGR--SR C-KRGAIANLILQLGRW--DS-AGKALQL-FAWVREQ--GRLWPDDSILLAIIRV- ALESRK---LTL--ANKFMT--IY-G--PLSPESAL--VAASVYVEQGFIYD AWRILKSL-E-QR-G-VTANSELYAKMIVKAGEA-GARDIVEDIVA--GLCFSLED CTRVMTVCSRLGLDE--EVE-ALYLRF-LEQG-LKPNIVMFTALMQARARAGNVRQALAL FWEMEE-QGVKPDLVACRVMIRLCEK-VGDLNKAVKVYN-NMRMAGFVPTSDVYNVMIRL YCKEGRLAKVKEVMREMEMW---GC-SPTSDTSKNLLFA- ---GY---

--KPS >gi|7529747|emb|CAB86932.1|	  526 residues, 50 /line  putative protein [Arabidopsis thaliana]

-MEVFKDAADETDQKRWRGLMLE-IESTGSAVPVLRQ--- YKTDGD-- ---Q-GLPRDLVLGTLVRFK--QLKKWN --LVSEILEWLRYQNW WNF-SE-- IDFLMLITAYGKLGN--FNGAERVLSVLSKMG--ST P-NVISYTALMESYGRG--GK-CNNAEAI-FRRMQSS--G-PEPSAITYQIILKT- FVEGDK---FKE--AEEVFE--TLLDEKKS--PLKPDQKMYHMMIYMYKKAGNYEK ARKVFSSM-V-GK-G-VPQSTVTYNSLM -SFET---SYK--EVS-KIYDQM-QRSD-IQPDVVSYALLIKAYGRARREEEALSV FEEMLD-AGVRPTHKAYNILLDAFAI-SGMVEQAKTVFK-SMRRDRIFPDLWSYTTMLSA YVNASDMEGAEKFFKRIKVD---GF-EPNIVTYGTLIKGY --AKANDVEKMM-EVYEKMRL-SG--IKANQTILTTIMDASGRCKNFGSALG WYKEME---SC-GVPPD--- ---QKAKNVLLSLASTQDELEEAKELTGI-RNETATIIARV--- -YGSDDDEEGV-

-EDISSESSDDEDEGDDDDDDARETVLYDKPQEGSL GYGSLQTEELVGL >gi|92868558|gb|ABE78562.1|	  553 residues, 50 /line  Pentatricopeptide repeat [Medicago truncatula] ---MCSLISKSHCHLGLGQLSLQPLQTRKLEYGIVNVKMSGRLK VMCKGMLTP---RKFMQRKRKMVVFKDAADEAEQKNWWRLMKL-IDETGSAVSVLNS--- EKMK-N-- ---Q-TIPKALVVGTLMRFK--QLKKWN --LVAEILEWLRAQNW WDF-GK-- MDFFMLITAYGKLGD--FNGAEKVLGLMNKNG--YA P-NVVSQTALMEAYGKG--GR-YNNAEAI-FRRMQTF--G-PEPSAFTYQIILKT- FVQGNK---FKE--AEEVFD--KLLNDEKS--PLRPDQKMFNMMIYMYKKSGSHEK ARQTFALM-A-ER-G-IKKATVTYNSLM -SFET---NYK--EVS-NIYDQM-QRAD-LRPDVVSYALLINAYGKARREEEALAV FEEMLD-AGVRPTRKAYNILLDAFSI-SGMVEQARIVFK-SMRRDKYMPDLCSYTTMLSA YVNAPDMEGAEKFFKRLIQD---GF-EPNVVTYGTLIKGY --AKANDIEKVM-EKYEEMLG-RG--IKANQTILTTIMDAHGKNGDFDSAVN WFKEMA---LN-GLLPD--- ---QKAKNILLSLAKTEEDIKEANELVL--HSIEINNLPKV--- -NDHEEDDDDD-

-DEDNY---EYFDTQDAM-- -AYDE >gi|8493579|gb|AAF75802.1|AC011000_5	  528 residues, 50 /line  Contains a RepB PF|01051 protein domain and multiple PPR PF|01535 repeats. EST gb|AA728420 comes from this gene. [Arabidopsis thaliana] MLAKIS---SSAKRFVHRSLVV-R GNAATFPLS---FSFCRRRAFSG-KTSYDYREVLR-TGLSDIELDDAIGLFG VMAQSR-- ---P-FPSIIEFSKLLSAIA--KMNKFD --LVISFGEKME-ILG ISH-NL-- YTYNILINCFCRCSR--LSLALALLGKMMKLG--YE P-DIVTLNSLLNGFCHG--NR-ISDAVAL-VDQMVEM--G-YKPDTVTFTTLIHG- LFLHNK---ASE--AVALID--RM---VQR--GCQPDLVTYGAVVNGLCKRGDTDL ALNLLNKM-E-AA-K-IEANVVIYSTVI -DSLCKYRHED--DAL-NLFTEM-ENKG-VRPNVITYSSLISCLCNYGRWSDASRL LSDMIE-RKINPNLVTFSALIDAFVK-KGKLVKAEKLYE-EMIKRSIDPNIFTYSSLING FCMLDRLGEAKQMLELMIRK---DC-LPNVVTYNTLINGF --CKAKRVDKGM-ELFREMSQ-RG--LVGNTVTYTTLIHGFFQARDCDNAQM VFKQMV---SV-GVHPN--- ---ILTYNILLDGLCKNGKLAKAMVVFEY--LQRSTMEPDI--- -YTYNIMIEGM-

-CKAGKWKMGGI YFVASALKE >gi|92876910|gb|ABE84187.1|	  501 residues, 50 /line  Pentatricopeptide repeat [Medicago truncatula] ---MRSIYRLV-VRDRFG---ICTMALVSRTLFS-S LATYHAAEA---RDFWHKEQTQD-LTRSVDILTTK-IGKGNSEDDILQSLIS DEGVNG-- ---I-HLSENLINRLLFRYKDDWK --SALAIFRWAGSHSN FKH-SQ-- QSYDMMVDILGRMKA--MDKMREILEEMRQES--LI --TLNTIAKVMRRFVGA--RQ-WKDAVRI-FDDLQFL--G-LEKNTESMNVLLDT- LCKEKF---VEQ--AREIYL--EL---K-H--YIAPNAHTFNILIHGWCNIRRVEE AHWTIQEM-K-GY-G-CRPCVISYSTII -QCYCQEQNFD--RVY-DLLDEM-QAQN-CSPNVVTYTTIMCALAKAEKFEEALQV VERMNA-VGCRPDTLFFNSLIYTLGR-AGRIDDATHVFKVAMPKASVAPNTSTYNSMISM FCYYAQEERAFGILKEMEKS---GLCKPDIQTYHPLIKSC --FKMREIDTWLNDILNDMVNKYH--IGLDLSTYTLLIHGLYRADRCKWAFD LFEEMA---DQ-DIVPR--- ---YKTCRLLLDEVKQKNMHLAVVKIEVL--MKK--

L >gi|110740599|dbj|BAE98404.1|	  546 residues, 50 /line  hypothetical protein [Arabidopsis thaliana]

NDWQRSL--ALLDWVHEEAK YTP-SVFAYNVVLRNVLRA---K---QFDIAHGLFDEMR-QRA- ---LAPDRYTYSTLITSFGKEGM--FDSALSWLQKMEQDR--VS G-DLVLYSNLIELSRRL--CD-YSKAISI-FSRLKRS--G-ITPDLVAYNSMINV- YGKAKL---FRE--ARLLIK--EM---NEA--GVLPNTVSYSTLLSVYVENHKFLE ALSVFAEM-K-EV-N-CALDLTTCNIMI -DVYGQLDMVK--EAD-RLFWSL-RKMD-IEPNVVSYNTILRVYGEAELFGEAIHL FRLMQR-KDIEQNVVTYNTMIKIYGK-TMEHEKATNLVQ-EMQSRGIEPNAITYSTIISI WGKAGKLDRAATLFQKLRSS---GV-EIDQVLYQTMIVAY --ERVGLMGHAK-RLLHELKL---PDNIPRETAITILAKAGRTEEATW VFRQAF---ES-GEVKD--- ---ISVFGCMINLYSRNQRYVNVIEVFEK--MRTAGYFPDS--- -NVIAMVLNAYGKQREFEKADTVYREMQEEG-CVFPDEVHFQML SLYSSK-KDF-- EMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASR VMNRM--- --RERGILKPFPG >gi|115436822|ref|NP_001043145.1|	  540 residues, 50 /line  Os01g0505500 [Oryza sativa (japonica cultivar-group)] --M-RCLRRPATHLLCSAR---SAHAGNA-PRVLDEMPLPPLAPSRRT -TTLVRAHHLLGAMRGPGFCTT-VGSESDVEPRFTV -VPGAAQE ---GLAPGVSEAAERVCRVV--SAQ---PEHRIAPV L--D--ALGVTVSPQLV---AEVLKNLSNAGILAL--AFFRWAERQQG FRY-SAEGFHNLIEALGKI---K---QFRLVWSLVEAMR-CRS- ---CL-SKDTFKIIVRRYARARK--VKEAVETFEKMSSFG--LK T-DLSDYNWLIDILSKS--KQ-VKKAHAI-FKEMKRK--GRFIPDLKTYTVLMEG- WGHEKD---LLM--LKAVYQ--EM---LDA--GIKPDVVAYGMLISAFCKSGKCDE AIKVFHEM-E-ES-G-CMPSPHVYCMLI -NGLGSMERLD--EAL-KYFQLS-KESG-FPMEVPTCNAVIGAYCRALEFHHAFKM VDEMRK-SGIGPNTRTYDIILNHLIK-SEKIEEAYNLFQ-RMERDGCEPELNTYTMMVGM FCSNERVDMALKVWKQMKEK---GV-LPCMHMFSALINGL --CFENRLEEAC-V--

-YFQE--MLDKGIRPPG--- -QLFSNLKEALVEGGRITLAQEVTQRLEMLR-RTP-

--MRG >gi|115436834|ref|NP_001043148.1|	  541 residues, 50 /line  Os01g0506100 [Oryza sativa (japonica cultivar-group)] -MLARPGRLAASTLP---ND--SAAAAASTVLSILRGEDP -AS-

L--P--AAGIDPCPAVF---QQLRPSLPTVPDSALP-ALARWAGEA-- --TAVSLLTSR---G---LFAAAWRLL--LA-PSP- ---TPPPLAAFAPLVRRYARLGR--APAALRAFQFLRRHPDRYMAGGD--IP A-AASLLNMAVDALCKE--GH-PRAAVEL-FERWRREEPD-SPPDERAYNILLHG- WSRAGR---LDK--VGKLWA--EM---RLA--GVRPTVVTYGTLIEGLCVKRRPDQ AIALLDEM-R-EE-G-IEANLLTCNPIV -YALAQAGRFQ--DAH-KVLEKF-PLYG-VAPNISTFNSLVMGYCKHGDLAGASSV LKVMTE-RGISPTTRTYNYFFMTFAK-NSDVESGMNFYS-KMIGNGYSPDQLTYVLLVKM LSRANRLELVVQMIQEMRTH---GF-EPDLATSTMLIHLL --CRRHQFEEAC-A--

-EFED--MFKRGIVPQY--- -ITYQKLMRELKRLGLVHLIQKLTNLMRSVP-HSTKLPGSY--- -RDKEG-DDSMEKRKLILQK AQAVSDVLKECKDPKELGKLKEDEETDVEVAD--RLVANIRRSVYGGAS---

TSSVMAPLS >gi|115444491|ref|NP_001046025.1|	  397 residues, 50 /line  Os02g0170000 [Oryza sativa (japonica cultivar-group)]

---MALL-E--- --AQ--CV P-TEDTYALLLRAYCNA--GS-LHRAEGV-ISEMREH--G-IPPNATVYNAYLDG- LLKARC---TEK--AVEVYQ--RM---KRE--RCRANTETFTLMINVYGKAKQPMS SMKVFNEM-K-SI-G-CKPNICTYTALV -NAFAREGLCE--KAE-EVFEEM-QQAG-HEPDVYAYNALMEAYSRAGLPQGASEI FSLMQH-MGCEPDRASYNILVDAYGR-AGLHEDAEAVFE-ELKQRGMSPTMKSHMLLLAA HARSGNATRCEEVMAQLHKS---GL-TPDTFALNAMLNAY --ARAGRLDDME-RLFAAMER-RG---DADVGTYNVAVNAYGRAGYVGRMEA AFAAVA---AR-GLAAD--- ---VVTWTARMGAYARRKEYGRCVGMVEE--MVDAGCYPDA--- -GTARVLLAACSDERQVEQVTAIVRSMHKKP-KT--

-LFTI >gi|115447143|ref|NP_001047351.1|	  580 residues, 50 /line  Os02g0601600 [Oryza sativa (japonica cultivar-group)] ---MCKKVNVV-KYLGTKGALIKFDVK--IMGHVGDG-GGWLAGC-LTPLIEDRFL -SSSTRYLASLGSKKVPFSHSP-LGGYRTGQPALGA -APDASYECR---MPPWRCE GAATTSTLQ--IVYLIIRDVSNVNLTVEEEEAARLIKNSL--SKARKWSVQDLIQC LGAD--CSGIRLTGNIV---DTLLFKFGDDWKSAL--GFFQWAQSRDD YRH-TAYACNRMVDLLGKM---R- --Q--IDQMWELLSDMHGRG--LV T--VETVAKSIRRLAGA--RR-WKDVVLL-FDKLEDM--G-LERNTETMNVLLDV- LCKERK---IEV--AREVFA--VL---S-P--HIPPDAYTFNIFVHGWCSIRRIDE AMWTIEEM-K-RR-G-FPPSVITYTTVL -EAYCKQRNFR--RVY-EVLDSM-GSQG-CHPNVITYTMIMTSLAKCERFEEALSV SHRMKS-SGCKPDTLFYNSLINLLGK-SGHLFEASQVFRVEMPMNGVSHNLATYNTMISI FCYYGRDDDALNVLKEMEAQ---SC-KPDIQSYRPLLRLFL--- --SRRGQADTVR-HLLSELTS-K- --H-NLGLD--- ---LDTYTLLIHGLCRVGDTVWAYQLFDE--MVSSEIAPRS--- -KTCVMLLDEAQRTNMETYVERIGNYMSSF--

-GISV >gi|115466680|ref|NP_001056939.1|	  511 residues, 50 /line  Os06g0172000 [Oryza sativa (japonica cultivar-group)] -MAAAPVASPFPALP---SS -SSSTTIAASTAARRCHDALLP-PPAAAGREPARTR -GSSSSLAGA---AGERRRR RGEEDGGEV--EAEAERRRKEEVNRKIASRKALSVILRRE--ATKAVLDKRK PGKG--TRRL--

--LPRTVLEALHERITALR--WDSALKVFDLMRDQ---VW--YR P-YVGIYVKLITMLGKC--KQ-PERAHEL-FQAMVDE--G-CAPNLESYTALVSA- YSRSGR---FDR--AFSLLE--QM---KAT-PGCRPDVQTYSILIKSCLHAYDFER VKYLMEDM-A-RA-G-IRPNVVTYNTLI -DAYGKAGRFA--EME-STLLEM-LTEN-CKPDVWTMNSTLRAFGGSGQIETMESC YEKFQA-SGISPNIKTYNILLDSYGK-AKMYEKMGAVME-YMQKYYYSWTIVTYNVVIDA FGRAGDLEQMEYIFRLMKSE---RI-KPNCVTLCSLVRAY --GRAGDVKKIK-T-- VLRIVE---NS-DITLD--- ---IVFFNCLVDAFGRVGCLAEMWDVLDI--MKLQRCKPDK--- -VTCTTMIKWFLIKGIDDHRVQYLRDLKDGR-SKD-

---NI >gi|115476328|ref|NP_001061760.1|	  554 residues, 50 /line  Os08g0402600 [Oryza sativa (japonica cultivar-group)] ALL-SLGRHADVRRAFGIL-

ASAGARPDTFAWNKAVQACV--AA GDLGEAV--GMLRRMGRDGA PPP-NAFSYNVVIAGMWRA---G---RGGDAVEVFDEMT-ERA- ---VLPNHITYNTMIDGHIKGGD--LEAGFRLRDQMVCHG--LK P-NAITYNVLLSGLCRA--GR-MGETSAL-LDEMASQ--K-MVPDGFTYSILFDG- LSRNGD---SKA--MLSLFG--KY---LKN--GVTIGDYTCSILLNGLCKDGKVSI AEEVLQSL-V-NA-G-LVPTRVIYNTLI -NGYCQTGELE--GAF-STFGQM-KSRH-IKPDHITYNALINGLCKAERITNAQDL LMEMQD-NGVNPTVETFNTLIDAYGR-TGQLEKCFIVLS-EMQENGLKPNVVSYGSIVNA FCKNGKIPEAVAILDDMFHK---DV-LPNAQVYNAIIDAY --VEHGPNDQAF-ILVEKMKS-NG--ISPSIVTYNLLIKGLCNQSQISEAEE IINSLS---NH-RLIPD--- ---AVSYNTLISACCYRGNIDKALDLQQR--MHKYGIKSTV--- -RTYHQLISGLGGAGRLNEMEYLYQKMMQNN-VVPSNAIHNIMV EAYSKY-G -NEIKAED LRKEM--- --LQKRNN-HDDT >gi|115482764|ref|NP_001064975.1|	  506 residues, 50 /line  Os10g0499500 [Oryza sativa (japonica cultivar-group)] ---MARRVAAR-ARAR-AGGVPRSEGT--IQDRARVG-S-

GGAEDAL--DVFDELLRR-G IGA-PIRSLNGALADVARD---N---PA-AAVSRFNRMA-RAGASM-- ---VTPTVHTYGILIGCCCSAGR--LDLGFAALGHVVKKG--FR V-EPIIFNPLLKGLCAD--KR-TDDAMDIVLRGMTEL--S-CVPNVFSHTIILKG- LCHENR---SQE--ALELLH--MM---ADDGGGCLPNVVSYSTVIDGLLKGGDPDK AYATYREM-L-DR-R-ILPNVVIYSSII -AALCKGQAMD--KAM-EVHDRM-VKNG-VTPNCFTYTSLVHGFCSSGQLTEAIKF LEKMCS-NGVEPNVVTYSSFMDYLCK-NGRCTEARKIFD-SMVKRGLKPDITTYSSLLHG YAIEGALVEMHGLFDLMVQS---DM-QPDHYVFNTLIYAS --AKQGKVDEAM-LVFSKMRQ-QG--LKPNCVTYSTLINGYCKITRMENALA LFQEMV---SN-GVSPN--- ---FITYNIMLQGLFRTGRTATAKEFYVQ--IIKSGKK-DL--- -IEQGLL-

-EELDDLFLSMEDNDC

-STVSTPAC >gi|125528002|gb|EAY76116.1|	  390 residues, 50 /line  hypothetical protein OsI_003963 [Oryza sativa (indica cultivar-group)] ---MAAAVRLLLRRRL -STATAPPPTPGSILNPSSPST-PLTSRQKSRLAISL--- LK--STPSPPPDQI---LSICRAA ALSPDSHLD--RVAL---SL--AASKLSSAPDSVRD LAS-

---SLLTPHHAPHAIALFGQAGL--LP- ---DAVSTF---KSSPSTRSLNALLFA- CLVSGN---HAE--AARVFQ--TF---PDA-YSVKPNTDTFNAIIKSFAESGTTRS FYSVLDEM-C-KK-G-VKPNATTFTTAI -AGFYKEERFD--DVG-KVIELM-KKHG-CGESLPVFNVRVQGLCKLGRSGDAKAL LNEMVK-KGTKPSWLTYNHLIHGFCK-EGDLEEAKRLYK-EMAKKGLVGDSSFYYMLIYY LCKGGDFDTAVGVYNEIAAR---NW-VPCFSTMKMLVNGL --AGSSRVDEAK-GIIEKMKE-K-

FPDKA--- -EGWKEVE

DALPQ >gi|125535814|gb|EAY82302.1|	  578 residues, 50 /line  hypothetical protein OsI_036261 [Oryza sativa (indica cultivar-group)] -MPLATLLGHL-AAG-RFGRVQALTGA--ATAAAAHRLLHLLLRTAPP -PP-LPDLVSLARWSRAHFRAP-L-PLRLHGLLLARL--- AS--K---GLYPLL---RSELHVL AAARLHSPA--SILRALPSPSASASASTPLIADMLVL--- --ALARASQPLRAYD--AFLLAGESHPR HRP-STSSVNALLAGLVG-- AKR--VDLAEKAFRSALRRR--VS P-DIYTFNTVISGLCRI--GQ-LRKAGDV-AKDIKAW--G-LAPSVATYNSLIDG- YCKKGGAGNMYH--VDMLLK--EM---VEA--GISPTAVTFGVLINGYCKNSNTAA AVRVFEEM-K-QQ-G-IAASVVTYNSLI -SGLCSEGKVE--EGV-KLMEEM-EDLG-LSPNEITFGCVLKGFCKKGMMADANDW IDGMTE-RNVEPDVVIYTILIDGYRR-LGKMEDAMAVKE-AMAKKGISPNVTTYNCLITG FSRSGDWRSASGLLDEMKEK---GI-EADVVTYNVLIGAL --CCKGEVRKAV-KLLDEMSE-VG--LEPNHLTYNTIIQGFCDKGNIKSAYE IRTRME---KC-RKRAN--- ---VVTYNVFIKYFCQIGKMDEANDLLNE--MLDKCLVPNG--- -ITYETIKEGMMEKGYTPDIRGC-

-TVSQ--- --ASEN---PASS >gi|125537825|gb|EAY84220.1|	  486 residues, 50 /line  hypothetical protein OsI_005453 [Oryza sativa (indica cultivar-group)] --M-SLVNRPLPALY-GICTASAK -TRAWWLCRDGNLP-STSRISCTEPSNG -G--SAMELEVMDR---NEQTYHE NSSASE---DEDDDEEEAVEWSKDELDAISALFDRP--MRQ--K PPKP--PNP-VRQ---RPLPLPLPHKTRLPNA-PAPKQHIRLAA -RA-ALSSRSSFSDQVCKN---PEVLIGIAR-EIAALPPE SDVSIVLDRWVRFLRKGSLSMTIRELGHMGL--PERALQTLCWAQRQTV-VP--LF P-DDRILASTIEVLARF--DQ-LK-MEDALEQC---VPSASRAVLEAMVSG- FIRAGK---VGL--ARKLLEFATI---NKR--TLSPSVH-VKLMLEAVRTPEGYGL AAALLDEL-G-ER-PELHVRQQDCTAVM -KVCVKLRRYA--AVE-SLFGWF-RDTG-GRPTVVMYTAVIHSRCRDGRHREALSL AWEMERHAGGLLDLPAYRVLVKLCVA-LRDHERGVRYLA-RMKDAGFVPTGDMYGGLIGG YAAEGRMGRCRRLIREAELA---GV-KLERRLLS--

-RLS EMGV

EHSQL >gi|125548275|gb|EAY94097.1|	  554 residues, 50 /line  hypothetical protein OsI_015330 [Oryza sativa (indica cultivar-group)] ---MASSSAAA-F---SPTSHHSPPPLSPLHL -RLRLRMLPSMMPRPATPARSP--PTTPSRPS -PPWRTPRAP---RRRWRCS AASRHAPDLRRLMRLYVTAATAFVARGSLPMAHEVMRGMVAAFG--EA GRLPEAA--DMVLEMRSH-G LPL-CVETANWVLRVGLET---G---SFVYARKVFDGMT-RAG- ---VCPDERSFRALVVVCCREGK--VEEVDALLAAMWRYG--FS L-DNATCTVVVRSLCEK--GR-FKDVSEF-FRRMLEM--G-TPPNVVNYTAWIDG- LCKRRY---VKQ--AFHVLE--EM---VGR--GLKPNVYTHTTLIDGLCKIGWTER AFRLFLKLIK-SS-S-YKPNVHTYTVMI -GGYCREGKLA--RAE-MLLVRM-VEQG-LKPNTNTYTTLIGGHCKGGSFDRAFEL MNKMKQ-EGFLPNIYTYNAVIDGFCK-KGKIQEAYKVLR-MATSQGLKFDKITYTILITE HCKQGHITYALDLFDRMVEN---GC-CPDIEAYTSLISTY --CQQRQMEESQ-KFFDKCLM-IG--LLPTKQTYTSMIAGYCKVGRSTMALR VFERMV---QN-GCFAD--- ---SILMCS---

--NNVVSATRHSPLHE AHGLG--- --ANRML-D >gi|125569916|gb|EAZ11431.1|	  563 residues, 50 /line  hypothetical protein OsJ_001256 [Oryza sativa (japonica cultivar-group)]

--MAHEVMRGMVAAFG--EA GRLPEAA--DMVLEMRSH-G LPL-CVETANWVLRVGLET---G---SFVYARKVFDGMT-RAG- ---VSPMNRGFGALVVVCCREGK--VEEVDALLAAMWRYG--FS L-DNATCTVVVRSLCEK--GR-FKDVSEF-FRRMLET--G-TPPNVVNYTAWIDG- LCKRRY---VKQ--AFHVLE--EM---VGR--GLKPNVYTHTTLIDGLCKIGWTER AFRLFLKLIK-SS-S-YKPNVHTYTVMI -GGYCREGKLA--RAE-MLLVRM-VEQG-LKPNTNTYTTLIGGHCKGGSFDRAFEL MNKMKQ-EGFLPNIYTYNAVIDGFCK-KGKIQEAYKVLR-MATSQGLKFDKITYTILITE HCKQGHITYALDLFDRMVEN---GC-CPDIEAYTSLISTY --CQQRQMEESQ-KFFDKCLM-IG--LLPTKQTYTSMIAGYCKVGRSTLALR VFERMV---QN-GCFAD--- ---SITYGALISGLCKESRLEEAKALYEG--MLDKRLVPCE--- -VTRVTLTFEYCRREKTSIAVSVLDRLDKRQ-QVHTVDVVVRKL SALGDV-- DAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASE MSEKF--- --SKKISSFKEKR >gi|125553492|gb|EAY99201.1|	  438 residues, 50 /line  hypothetical protein OsI_020434 [Oryza sativa (indica cultivar-group)]

--MWGTTAAAVRRLCAAGD--VRSALAMLARGTKSG-DAA L-DVTACTALVNGCCKG--GD-VAEARRV-FDEMPLL--G-LAPNEVTYTALMHG- YFTHGQ---REK--GFALFE--EM---RRG--GVEPNLYTYNCLIGEWCRTGEFER ARSLFDEM-P-VR-G-IVRNVVSYNTLI -AGLCRHGKLW--DAA-KLLDMM-RTEG-TRPSIITFNLLVDGYGKAGKMSNALPF FNQMKA-AGFQPSAVTYNMLIAGFCR-ARDMTRANRALS-DMKERGLEPTKVTYTILIDS FARENHMGKAFEILAGMEKA---GL-EVDAHTYGVLVRAL --CMEGNMKDAR-KLFQSMGE-KG--VEPSNVIYDMMIYGYGREGSSYKALK LIMEMR---QK-GLIPN--- ---SASYGLTIRVLCKDDKCQEAEALLDD--MVRAGLQTMG--- -QALES--

-DSIRDKGLE--IVSVHDKGLEVNSAPE PTDQV-EA AVLHKPKVNKNYL >gi|125554437|gb|EAZ00043.1|	  579 residues, 50 /line  hypothetical protein OsI_021275 [Oryza sativa (indica cultivar-group)]

--MGVYARS--GR-FDDARQL-LDAMRDQ--D-IEPDLVSFNTLINA- RAKSGC---LAAGVALELLH--EV---RQA--GLRPDAITYNTLISACSQGSNLDD AVAVFEEM-I-AS-E-CRPDLWTYNAMV -SVHGRCGKAQ--EAE-LMFKEL-VEKG-FQPDAVTYNSLLYAFAKEGDVERVERV CEELVK-AGFRKDGITYNTMIHMYGK-MGRLDLALGLYD-EMRAIGCTPDAVTYTVLVDS LGKMDRISEAGKVLEEMADA---GL-KPTLVTFSALICAY --AKSGRQDDAE-RTFDRMVE-SG--VKPDRLAYLVMLDVFARSDETRKLMV LYRAMI---KD-GYKPD--- ---DGLYQVLLAALAKGNEHDEIEGVIQD--MEAVFEMNPL--- -VISSILIKAECISQGASLLKRACLQGYEPDVEEKDWGADLRKL SAGAALVALTLWLDQMQGAPESPKSIVLVTGEGEYNMVSLRKTIRAYLLEMGSPFLPCRS RSGRFVVKA---YSLKMWLKDSPFCLDLELKDAPALPKTNSMKLTEGYFMRAGLVPVFKD IHERLGEVWPKKFSRLALLSEESRDEVIKADIKGRKEKLEKMKKQGLAIAKRSKRGPRRG KFVKQQSTQEVLK >gi|125555457|gb|EAZ01063.1|	  552 residues, 50 /line  hypothetical protein OsI_022295 [Oryza sativa (indica cultivar-group)] ---MAAVGWHV-R--MKGR--RKGGGGGG-PLLALRLFLAPLHPAAV- THHSFNSALLRFP--- LP--PHLL --PPFFSRSLR- ---RFPGR LAP-TLLSFNLLLKCVCSSLVPRDPRR---YLDVALRILHEIIPGWD- ---LAPDKFTYSTVVSALADAGR--VDDAVALVHEMVADG--VV A--AEAFNPVLRAMLRA--GD-VKGAAKL-FEFMQLK--G-CVPTAATYNVLVHG- LLVCGR---AGA--AMGVMR--RM---ERE--GVVPGVMTYGAVVDGLVRCGRVKD AWKVAEEM-E-RN-G-LARNEFVYSTVI -TGFCKSGEID--CAL-KVWEAM-VASP-VRPNVVLYSAMIGGLANFGKMTEAELL FREMID-SKCAPNIITYGSMIQGYFK-IGDTSRALSVWE-EMIGAGCMPNAVSYSILING LCNVGRLKDAMMVWKHMLDR---GC-APDTIAYTSMIKGL --CVSGMVDGGL-RLFYDMLA-SGH-ADPDVISYNVLLDGLLLAKDLPRAMD LLNRML---DQ-GCDPD--- ---TVTCNIFLREFGAGERKGREF ---LEGLVVRLCDRRRNMAAGEVLMVMLAKY-IVPEAPIWEMVV R---

---DVCRRKRVW RVIDKCWDEIWGP >gi|125557677|gb|EAZ03213.1|	  483 residues, 50 /line  hypothetical protein OsI_024445 [Oryza sativa (indica cultivar-group)]

-MTE ---N-GVG P-DLVTHNIVLSALKNG--AQ-YSKAISY-FEIMKGA---NVTSDTFTLNIIIHC- LVKIGQ---CGE--AIELFN--SM---RERRTKCPPDVVTYTSIMHSYCIYGQVEN CKAIFDLM-V-AE-G-VKPNIVAYNSLL -GAYASRGMHR--EAL-AIFNLI-KKNG-LRPDIVSYTSLLNAYGRSAQPEKAREV FNKMKK-NSCKPNKVSYNALIDAYGS-AGMLKEAVGLLH-EMEKDGIQPDVVSISTLLAA CGRCRQITRIETILEAARSR---GI-DLNTVAYNSGIKSY --LSFGDYEKAL-ELYTSMRE-SN--VKPDAVTYNILISGSSKLGKYTESLR FFEDMV---DS-KVSSTKEFLWTIRWLEESLGPVQRDGSKWIRDWKTASEMIEYLDSSLS SISVGTLNHVLNFLGKCGKTENMMKLFYK--MVTSCSTVGL--- -STYAVVLRNLLVVGKWRKYIEVLQWMEDSG-VHPTLYMFQNVL P---

YIWRENGMDFAATMQEKISMIRPT -LIIISRRL >gi|125558723|gb|EAZ04259.1|	  528 residues, 50 /line  hypothetical protein OsI_025491 [Oryza sativa (indica cultivar-group)] --MIVYD-SKSS---SGGGVGDGGTGGGEVGS ---GGSGGGGEVGRGGDG-GAGGVDGDSSIMAGA-- -VCFGV--VAARGVIDCE---VPSMYCG G--- GESR LEP-DAPLFSDLISAFARA---R---LPDAALELLASAQ-AIG- ---LTPRSNAVTALISSLGSARR--VAEAEALFLEFFLAG-EIK P-RTRAYNALLKGYVKI--GS-LKNAEQV-LDEMSQC--G-VAPDEATYSLLVDA- YTRAGR---WES--ARILLK--EM---EAD--GVKPSSYVFSRILAGFRDRGEWQK AFAVLREM-H-AS-G-VRPDRHFYNVMI -DTFGKYNCLG--HAM-DAFDRM-REEG-IEPDVVTWNTLIDAHCKGGRHDRAIEL FDEMRE-SNCPLGTTTYNIMINLLGE-EQRWEGVEAMLA-EMKEQGLVPNIITYTTLVDV YGRSGRFKEAVDCIEAMKAD---GL-KPSSTMYHALVNAY --AQRGLADHAL-NVVKAMRA-DG--LEASTVVLNSLINAFGEDRRIAEAFS VLQFMK---EN-GLRPD--- ---VITYTTLMKALIRVEQFEKVPVIYEE--MITSGCAPDR--- -KARAMLRSALRYMKHMRV-

A >gi|125575277|gb|EAZ16561.1|	  526 residues, 50 /line  hypothetical protein OsJ_030770 [Oryza sativa (japonica cultivar-group)] -MARRAASRAA-G--- -ALRSEGSIQGRGG-- -RAGGS--

-GG---GAEDARHVFDELLR-RG- IPDVFSYNILLNGLCDENR--SQEALELLHIMADDGGDCP P-DVVSYSTVINGFFKE--GD-LDKMLDQ---RISPNVVTYNSIIAA- LCKAQT---VDK--AMEVLT--TM---VKS--GVMPDCMTYNSIVHGFCSSGQPKE AIVFLKKM-R-SD-G-VEPDVVTYNSLM -DYLCKNGRCT--EAR-KIFDSM-TKRG-LKPDITTYGTLLQGYATKGALVEMHGL LDLMVR-NGIHPNHYVFSILVCAYAK-QEKVEEAMLVFS-KMRQQGLNPNAVTYGTVIDV LCKSGRVEDAMLYFEQMIDE---GL-RPDSIVYNSLIHSL --CIFDKWEKAE-ELFLEMLD-RG--ICLSTIFFNSIIDSHCKEGRVIESGK LFDLMV---RI-GVKPDIITL-GRNDEAKDLFVAFSSNGL VPNYWTYRLMAENIIGQGLLEELDQLFLS--MEDNGCTVDS--- -GMLNFIVRELLQRGEITRAGTYLSMIDE---

KHFSLEASTASLFIDLLSGGKYQEYHIF LPEK ---YKSFIESLSC >gi|125587013|gb|EAZ27677.1|	  499 residues, 50 /line  hypothetical protein OsJ_011160 [Oryza sativa (japonica cultivar-group)] -MRRLLSAPLRR -RLCTAAVAAAAPDPAL---

---ASSAELAYRLLRRHHSDPK-- --RLTAALSGSG L-DPTSPRLLDASLAKT--GH-VAVAEQL-VEELQPRLPLSLRHYTALLYG- WCRMGK---LDE--AKHVLA--RM---KAA--EVAPDVVVFNTLLAGFVADGRFED AFELAREM-E-RR-G-CPPNAVSYTTLM -QGLGARGRVD--EAM-RVFVEM-RRKG-CAPDSVTYGTLVTAFCKAGRISQGYEF LDVMAR-EGLRVDAGVYLGFFVAHEK-KEQLEECLELME-RMRECRCPPDLSIYNVVIRL ACKLGETKQAVALWNEMETN---EL-SPGVDTFAIMVTGL --VGQGVLVEAC-GYFKDMVG-RGLFVAPQYGVLKDLLNSLVRDQKLELAKD VWGCIM---TK-GCELN--- ---FGAWTIWIHALYAKKHVKEACMYCLD--MLDAGLMPQP--- -DTFAKLMKGLKKLYNRQIAAEITEKVRKMA-

--EERHVSFK-- --MYKRRGVRDLEEKPKAKRKKGQKRSRLRQAGQNQSNRH ADKTDLFDDFDDE >gi|125587900|gb|EAZ28564.1|	  550 residues, 50 /line  hypothetical protein OsJ_012047 [Oryza sativa (japonica cultivar-group)] -MRRCGRIFF---PP--SLKFVSHSGGR-LSATRFS -TTGFDLPDWFRNPKDDGSCAG-LDDEEDDIFVLP- TEPNVSDERR---SQSST-- ---SRSLSIRPGFPATASHEDAEF--EADI--DEVS RILS--ARFASPEAIMI---AMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGG YCH-CADSYD-- LMVDILGKFKQ--FDLMWGLINQMVEV--GGL M-SLMTMTKVMRRLAGA--SR-WTEAIDA-FHKMDRF---GVVKDTKAMNVLLDT- LCKERS---VKR--ARGVFQ--EL---RG---TIPPDENSFNTLVHGWCKARMLKE ALDTMEEM-K-QH-G-FSPSVVTYTSLV -EAYCMEKDFQ--TVY-ALLDEM-RKRR-CPPNVVTYTILMHALGKAGRTREALDT FDKLKE-DGVAPDASFYNSLIYILGR-AGRLEDAYSVVE-EMRTTGIAPNVTTFNTLISA ACDHSQAENALKLLVKMEEQ---SC-NPDIKTYTPLLKLC --CKRQWVKILL-FLVCHMFR-KD--ISPDFSTYTLLVSWLCRNGKVAQSCL FLEEMV---SK-GFAPK--- ---QETFDLVMEKL-- ---EKRNLQSVYKKIQVL--

---RTQSNFFKLD >gi|125605710|gb|EAZ44746.1|	  581 residues, 50 /line  hypothetical protein OsJ_028229 [Oryza sativa (japonica cultivar-group)] -MPPSPPLRHLLSFRRRPLAPRFL -LLPRRFSASASASALQAATPPPSSSSAARLAAAVH -G--SAASGGF-

--AHAIRLTKHLV---RASSFPSHCPGAAGAAAAAALAST SAS-PAPALGVLVIALSQM---A---LPDEALSVFGRLRE LPALPACNAILDGLVKAHM--LARVWELFDEMLGRG--MV P-SVVTYNTLINACRHQ--GD-VAKAWEV-WDQMVAR--R-IDPNVVTYTTMICA- LCEEDC---IGD--AEGLFL--EM---KEA--GMRPNLYTYNALMSSHFKRDNIKH ALVFYYDL-L-KC-G-LVPNDVIFTTLI -DGLCQANRIT--EAK-NIFLDM-PRYE-VAPTVPVYNSLIHGAFRSGYAQEALAF FQEIIR-KGLRPDEFTCSIVVRGLC---DALVTCT-RMSEVGVEPHVVTYSSLIDG HSKNGEMEIAMAIYTEMVAK---GV-EPNVVTYTALIHGH --AKNGDMDAAF-WLQKEMEE-KG--IYSNAITVSVLVDGLCRENRVQDAVR FIMEYSGQKKS-EKNPSI-- -ANSVTYMTLIYGLYIDGQYNEACHFFSC--MRDSGMVPDR--- -FTYTLVIRGLCMLGYVLNAMMLYADMVK---

LDMRC--- VRSWEMGGVAEH ERLVGQTVDCPSC >gi|140067179|gb|ABO83338.1|	  467 residues, 50 /line  Pentatricopeptide repeat [Medicago truncatula] MGKIP-P--SFRSALSNPNLIHRSSSLIPSSP -KPHHFPNKTRKPHQKQ---

QQS-QSQSQSPKPVSVFKS---P---NLQEAKSIFNSFVN-SSN ---APIDSRFHNSLLQSYASIST--INDSIAFLRHMTKTHPSFS P-DKSTYHILLTHCCKS--TDSKYSTLSLIHQT-LNLMVSD--G-ISPDKGTVDLAVRS- LCTADR---VDD--AVELIK--EL---SSK--HCSPDIYSYNFLVKNLCKSRTLSL VYAFIDEM-R-TKFD-VKPNLVTYTILI -DNVCNTKNLR--EAT-RLVDIL-EEEG-FKPDCFLYNTIMKGYCMLSRGSEAIEV YNRMKE-KGVEPDLITYNTLIFGLSK-SGRVSEAKKLLR-VMAEKGHFPDEVTYTSLMNG MCRKGETLAALALLEEMEMK---GC-SPNTCTYNTLLHGL --CKSRMFDKAM-ELYGAMKS-DG--LKLDMASYATFVRALCSVGRVADAYE VFDYAV---ES-KSLSD--- ---VAAYSTLESTLKWFKKAKE--

EGLKF >gi|147776740|emb|CAN72416.1|	  422 residues, 50 /line  hypothetical protein [Vitis vinifera] WWEPHVKPSPIG

SPSRV---QKLIASQ---SDPLLAKEIFDLASLQPN

---FKHSYSSFHILILKLGWARQ--FSLMQDLLMRLKSEQ--YS I-NPSLFSDIIEIYGEA--NL-PDQALKT-FHSMLQF--H-SKPLPKHLNXLLQL- LVSHRN--YIRP--AFDLFK--SA---HRY--GVSPDTKSYNILMSAFCFNGDLSI AYTLFNQM-F-KR-D-VAPDVESYRILM -QGLCRKSQVN--RAV-DLLEDM-LNKG-YVPDALSYTTLLNSLCRKKKLKEAYKL LCRMKV-KGCNPDIVHYNTVILGFCR-EGRXLDACKVLE-DMPSNGCSPNLMSYGTLVSG LCDQGLYDEAKNYVEEMLSK---GF-SPHFSVFHALINGF --CNVGKLEEAC-EVLXEMLR-HG--EAXHTETWVAIIPRICEVDKLVRMEN IFDEXL---KL-EITPN--- T--- -RLVEAGIGL--

--EE YVIRKVRDKSRKA >gi|87240852|gb|ABD32710.1|	  451 residues, 50 /line  Tetratricopeptide-like helical [Medicago truncatula] -MHRSFTVLSKN-LK--SIASSSSSDGIFSFKFHSSSSSSSPIG

SPTRV---QKLIASQ---SDPLLAKEIFDYASLQPN

---FRHNYSTYLILILKFGRSKH--FSLLDDLLRRLKSES--SQ PITPTLFSYLIKIYGEA--NL-PDKALNT-FYIMLQF--N-IKPLTKHLNRILDI- LVSHRN--YLRP--AFDLFK--DA---HKH--GVFPDTKSYNILMRAFCLNGDISI AYTLFNKM-F-KR-D-VVPDIQSYRILM -QALCRKSQVN--GAV-DLFEDM-LNKG-FVPDSFTYTTLLNSLCRKKKLREAYKL LCRMKV-KGCNPDIVHYNTVILGFCR-EGRAHDACKVID-DMQANGCLPNLVSYRTLVNG LCHLGMLDEATKYVEEMLSK---GF-SPHFAVIHALVKGF --CNVGRIEEAC-GVLTKSLE-HR--EAPHKDTWMIIVPQICEVDDGVKIDG VLEEVL---KI-EIKGD--- T--- -RIVDAGIGL--

--ED YLIRKIRAKSRQF >gi|147784915|emb|CAN72973.1|	  550 residues, 50 /line  hypothetical protein [Vitis vinifera] -MVKSPPLKALS--LFTSS--ALQGXQHTHQS--ISFILHLLISSNLF -SHSQSLLLKLISGQISSSSFTPS

---SLFHELTQPHLDSFPTHVLIHEAIINAHV--RS QLPEQAL--FYXNQMIGR-G LVP-GSNTFNNLLILLIKS---N---FFEKAWRVFNETK--GN- ---VKLDVYSFGIMIKGCCEVGY--LDKGFEVLGQMEEMG--LS P-NVVVYTTLIDGCCKN--GD-IERGKQL-FYKMGEL--D-VVANQYTYTVLING- FFKMGL---KKD--GIELYE--KM---KLT--GIVPNVYTYNSMICRCCNDGKLNN AFELFDEM-R-ER-G-VACNVVTYNTLI -GGLCQERRVL--EAE-RLMCRM-KRDG-LSPNLISYNTLIDGYCSIGNLDKASSL FNQMKS-SGQSPSLATYNILIAGFSE-AKNSAGVTDMVR-EMEARGLSPSKVTYTILMDA LVRSDNIEKAFQIYSSMEKA---GL-VADIYIYGVLIHGL --CVVGDMKEAS-KLFKSLDE-MH--LKPNDVIYNTMIYGYCKEGSSYRALR LLKEMG---EN-GMVPN--- ---VASYNSTIXILCKDEKWTEAEVLLKD--MIELGLKPSI--- -SIWNMISKAR-

-FDNV >gi|147799110|emb|CAN63706.1|	  390 residues, 50 /line  hypothetical protein [Vitis vinifera] ---MAMLRPPSFSKTNFLR--KRRKWPLSP-- --YKATWHETFHHRQ-

---AMQTLKNTIANQSPSPQSPSNSQFLSILI--DSF--- RIYN SDP-TPNAYRFVISTLTRC- -RQ--FHHLPPLLHRLEKVE--KF ETPEFIFTNLIKI-LLKSQAM--N-IRLEESSFRILVAA- LCRIKK---HNY--AIRILN--YM---LND--GYAVDAKMCSIILSSLCEQKGLSG--DE VLRFMEEM-R-KL-G-FYPGRVDCNNVI -XFLVKEGMVM--DAL-GVFDQM-KTDG-IKPDTVSYTMILNGVTADGDYEKADDL FDEMLV-LGVVPDIHAYNVYINSLCK-QNNIEEGVRMLA-SMRELGCKPDYVXYNMLLEG MSKVRDLGGMRELAREMELE---GV-QWNWETYRIMLDGL --VGKGEIDESC-SLVGGNVX-QVFL--

LLVVRHLMK >gi|147814819|emb|CAN74746.1|	  514 residues, 50 /line  hypothetical protein [Vitis vinifera] -MERLFSSLSICTVPGTRIYWDKRYVK-AQFVVEFSNKNEIKLGVQCNARVNHRKP -TKNLPHPRRAKLPPEPEISTF-LKGGNSGTEQ--- --SEMGTVLD---KELDPND DGFLVD---GIEGRKEGEIVWDSDEIEAISSLFMGR--IPQKPGKLNRERPL PLP-LPYKI---RPMGLPTTK--RHVRAASSMPYASRASL SKQ-VYKNPDFLISIAREI---RNLPLE DDVSPVLNKWVRFLRKGSLSLTIRELGHMGL--PERALQTFFWAQKQPQL-- FPDDRILASTVEVLART--HKLK--VPFSLEKF---TGLATRSVIEALARG- FIRRGS---LSL--AWKLLLVA-KDS--KRMLGPSIYAKLIFELGKNPDKH---SL VQALLDEL-G-ERE-DLKLSHQDCTAVM -KVCIRLGKFE--IVE-SLFNWY-KQSE-NSPSVVMYTTLIHSRYTEKKYREALAV VWEMEA-SDCLFDLPAYRVVIKLFIA-LNDLSRTGRYFS-KLKEAGFSPTYDIYRDMLKI YMVFRRLAKCREVCKELEMS---GF-KLDKGTLSQLLQLE

-RENR >gi|147834641|emb|CAN60904.1|	  580 residues, 50 /line  hypothetical protein [Vitis vinifera] ---MAGXTISR---ARSLSNKSCCFH-- APMGASLRPXFLGSAANTPNAGDTNSSTFHFSFN-- -RNFNSLASSESTPPITZ---EVISKSV LSSQWHFIE--- --QVSPNLTPALI---SN--VLYNLCSKPQLVSDFIHHL---HP HCL-DTKSYCLAVVLLARLPSPKLALQLLKQVMET---RIATNRELFDELT- ---LSRDRLSVKSSIVFDLLEGK--LKKAREFIGFMEGLG--FK P-NVVSYNTIIHGYSSR--GN-IEGARRI-LDAMRVK--G-IEPDSYTYGSLISG- MCKEGR---LEE--ASGLFD--KM---VEI--GLVPNAVTYNTLIDGYCNKGDLER AFSYRDEM-V-KK-G-IMPSVSTYNLLV -HALFMEGRMG--EAD-DMIKEM-RKKG-IIPDAITYNILINGYSRCGNAKRAFDL HNEMLS-KGIEPTHVTYTSLIYVLSR-RNRMKEADDLFE-KILDQGVSPDVIMFNAMIDG HCANGNVERAFMLLKEMDRK---SV-PPDEVTFNTLMQGR --CREGKVEEAR-MLLDEMKX-RG--IKPDHISYNTLISGYGRRGDIKDAFX VRDEML---SI-GFNPT--- ---LLTYNALIKCLCKNQEGDLAEELLKE--MVNKGISPDD--- -STYLSLIEGMGNVDTLVE-

-DNAS >gi|15226343|ref|NP_178283.1|	  559 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] -MVRE---

ALQFLSRLRKSSNLPDPFTCNKHIHQLI--NS NCGILSL--KFLAYLVSR-G YTP-HRSSFNSVVSFVCKL---G---QVKFAEDIVHSMP-RFG- ---CEPDVISYNSLIDGHCRNGD--IRSASLVLESLRAS---HGFICK P-DIVSFNSLFNGFSKM--KM-LDEVFVY-MGVML-K--C-CSPNVVTYSTWIDT- FCKSGE---LQL--ALKSFH--SM---KRD--ALSPNVVTFTCLIDGYCKAGDLEV AVSLYKEM-R-RV-R-MSLNVVTYTALI -DGFCKKGEMQ--RAE-EMYSRM-VEDR-VEPNSLVYTTIIDGFFQRGDSDNAMKF LAKMLN-QGMRLDITAYGVIISGLCG-NGKLKEATEIVE-DMEKSDLVPDMVIFTTMMNA YFKSGRMKAAVNMYHKLIER---GF-EPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND VMYTVLIDALCKEGDFIEVE-RLFSKISE-AG--LVPDKFMYTSWIAGLCKQGNLVDAFK LKTRMV---QE-GLLLD--- ---LLAYTTLIYGLASKGLMVEARQVFDE--MLNSGISPDS--- -AVFDLLIRAYEKEGNMAAASDLLLDMQRRG-LVTAVSDA

DCSKQCGNEVNCS >gi|15228825|ref|NP_188906.1|	  562 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] ---MLTKLRISKLVSYTLPRRIFQRRFL VTNNTAEESPIVAAESPELPSW---I-- -KDFLSNKPSSSSSSVSKDDEDFV IPSLANWVE--SQKFSRQQVSEGNVVKKPVEDIDKVCDFL--NK-KDTSHEDVVKE L--S--KCDVVVTESLV---L--QVLRRFSNGWNQAYGFFIWANSQTG YVH-SGHTYN-- AMVDVLGKCRN--FDLMWELVNEMNKNEESKL V-TLDTMSKVMRRLAKS--GK-YNKAVDA-FLEMEKS-YG-VKTDTIAMNSLMDA- LVKENS---IEH--AHEVFL--KL---FDT---IKPDARTFNILIHGFCKARKFDD ARAMMDLM-K-VT-E-FTPDVVTYTSFV -EAYCKEGDFR--RVN-EMLEEM-RENG-CNPNVVTYTIVMHSLGKSKQVAEALGV YEKMKE-DGCVPDAKFYSSLIHILSK-TGRFKDAAEIFE-DMTNQGVRRDVLVYNTMISA ALHHSRDEMALRLLKRMEDEEGESC-SPNVETYAPLLKMC --CHKKKMKLLG-ILLHHMVK-ND--VSIDVSTYILLIRGLCMSGKVEEACL FFEEAV---RK-GMVPR--- ---DSTCKMLVDELEKKNMAEAKLKI-QS--LVQSKTMIDS--- -HS-

PLSVS >gi|15234269|ref|NP_192906.1|	  566 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] ---MAAKSQKTLVLLANLIKFPPLKAFSLLNSPNFHEFQHTHES--ISILLRLLLSGNLF -SHAQSLLLQVISGKIHSQFFTSS

---SLLHYLT--ESETSKTKFRLYEVIINSYV--QS QSLNLSI--SYFNEMVDN-G FVP-GSNCFNYLLTFVVGS---S---SFNQWWSFFNENK--SK- ---VVLDVYSFGILIKGCCEAGE--IEKSFDLLIELTEFG--FS P-NVVIYTTLIDGCCKK--GE-IEKAKDL-FFEMGKL--G-LVANERTYTVLING- LFKNGV---KKQ--GFEMYE--KM---QED--GVFPNLYTYNCVMNQLCKDGRTKD AFQVFDEM-R-ER-G-VSCNIVTYNTLI -GGLCREMKLN--EAN-KVVDQM-KSDG-INPNLITYNTLIDGFCGVGKLGKALSL CRDLKS-RGLSPSLVTYNILVSGFCR-KGDTSGAAKMVK-EMEERGIKPSKVTYTILIDT FARSDNMEKAIQLRLSMEEL---GL-VPDVHTYSVLIHGF --CIKGQMNEAS-RLFKSMVE-KN--CEPNEVIYNTMILGYCKEGSSYRALK LLKEME---EK-ELAPN--- ---VASYRYMIEVLCKERKSKEAERLVEK--MIDSGIDPST--- -SILSLISRA-KNDSHVS--

---SK >gi|15235161|ref|NP_195672.1|	  563 residues, 50 /line  EMB2453 (EMBRYO DEFECTIVE 2453); binding [Arabidopsis thaliana] -MDY-LLTSPSSLRFSDFISSIPKETDHKWLR -FSVNLGDARRSTRTRITCGAI-- -SSRRKLAERESAERENR---V-- LVRS--LMSRISDREP

--LVKTLDKYVKVVRCDH-- --CFLLFEELGKS--DK-WLQCLEV-FRWMQKQ--RWYIPDNGVYSKLISV- MGKKGQ---TRM--AMWLFS--EM---KNS--GCRPDASVYNALITAHLHTRDKAKALEK VRGYLDKM-K-GIER-CQPNVVTYNILL -RAFAQSGKVD--QVN-ALFKDL-DMSP-VSPDVYTFNGVMDAYGKNGMIKEMEAV LTRMRS-NECKPDIITFNVLIDSYGK-KQEFEKMEQTFK-SLMRSKEKPTLPTFNSMIIN YGKARMIDKAEWVFKKMNDM---NY-IPSFITYECMIMMY --GYCGSVSRAR-EIFEEVGE-SD--RVLKASTLNAMLEVYCRNGLYIEADK LFHNAS---AF-RVHPD--- ---ASTYKFLYKAYTKADMKEQVQILMKK--MEKDGIVPNK--- -RFFLEALEVFGSRLPGSGSENRKSTRSSRSRDSPKGRGGNQLT EFQD -KDNKHVFRAVQ -DCRKNYLENLSGHDKGSRDESRKPSQEKQPLFASDQNNM MIKEKKELFTRVL >gi|18394846|ref|NP_564110.1|	  537 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] ---MALLRSKLHLSRTL---SFISPLLPKTFS --TSAT-- -SLLSDHEND--ESAATI---TAAVSVP ISPLLTPEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHA--LSLDFSQIE- TSQVSPSVV---RCVIEKCG-SVRHGIPLHQSLAFFNWATSRDD YDH- -KSPHPYNEMIDLSGKVRQ--FDLAWHLIDLMKSRN--VE I-SIETFTILIRRYVRA--GL-ASEAVHC-FNRMEDY--G-CVPDKIAFSIVISN- LSRKRR---ASE--AQSFFD--SL---KDR---FEPDVIVYTNLVRGWCRAGEISE AEKVFKEM-K-LA-G-IEPNVYTYSIVI -DALCRCGQIS--RAH-DVFADM-LDSG-CAPNAITFNNLMRVHVKAGRTEKVLQV YNQMKK-LGCEPDTITYNFLIEAHCR-DENLENAVKVLN-TMIKKKCEVNASTFNTIFRY IEKKRDVNGAHRMYSKMMEA---KC-EPNTVTYNILMRMF --VGSKSTDMVL-KMKKEMDD-KE--VEPNVNTYRLLVTMFCGMGHWNNAYK LFKEMV---EEKCLTPS--- ---LSLYEMVLAQLRRAGQLKKHEELVEK--MIQKGLV--

-ARPL >gi|18396782|ref|NP_566222.1|	  508 residues, 50 /line  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] ---MSWL--IQNRIGNTLLRLNPS -SSSIAIFSTFIKNLSTASEQLP-

ETLDEYSQSEEIWNVIVGRDGDRDSEDDVFKR LSSDEICKRVNLSDGLV---H--KLLHRFRDDWRSALGILKWAESCKG HKH-SSDAYD-- MAVDILGKAKK--WDRMKEFVERMRGDK--LV --TLNTVAKIMRRFAGA--GE-WEEAVGI-FDRLGEF--G-LEKNTESMNLLLDT- LCKEKR---VEQ--ARVVLL--QL---K-S--HITPNAHTFNIFIHGWCKANRVEE ALWTIQEM-K-GH-G-FRPCVISYTTII -RCYCQQFEFI--KVY-EMLSEM-EANG-SPPNSITYTTIMSSLNAQKEFEEALRV ATRMKR-SGCKPDSLFYNCLIHTLAR-AGRLEEAERVFRVEMPELGVSINTSTYNSMIAM YCHHDEEDKAIELLKEMESS---NLCNPDVHTYQPLLRSC --FKRGDVVEVG-KLLKEMVT-KHH-LSLDESTYTFLIQRLCRANMCEWAYC LFEEMI---SQ-DITPR--- ---HRTCLLLLEEVKKKNMHESAERIEHI--MKTVKL---

TAPVK