In the plant Arabidopsis thaliana, At1g31280.1 is a gene model for the locus At1g31280.[1]
At1g31280.1/Header
Physiological function[]
At1g31280.1/Function_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ ______________ ________________ (At1g78590) NADK3 (At1g78590) is a NAD(H) kinase with a strong preference for NADH over NAD+. NAD(H) kinases phosphorylate NAD(H) with ATP (other phosphoryl donors are not used preferentially) to form NADP(H). Phosphorylation of NAD(H) is the sole known means of generating NADP(H) de novo.
Tissue expression[]
At1g31280.1/Expression
Subcellular localization[]
At1g31280.1/Localization_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________
NADK3-GFP has been shown by in vivo transient expression to be localized to the cytosol, confirmed by immunoblotting.
Biophysical properties[]
At1g31280.1/Biophysics_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ NADK3-GFP has been shown by in vivo transient expression to be localized to the cytosol, confirmed by immunoblotting.
Knockout phenotype[]
At1g31280.1/Knockout
Protein interactions[]
At1g31280.1/Interactions_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ This protein does not interact with calmodulin in the presence or absence of calcium or EGTA. NADK3 has been reported to be phosphorylated in vitro by AtMAPK4. NADK3 forms a homodimer.
Domain structure[]
At1g31280.1/Domains_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ NADK3 contains the conserved NAD(H) kinase domain, GSTAAMQSAGG for binding NAD and the upstream GGDGT ATP-binding domain.
Amino-acid sequence[]
>At1g31280.1
MERGGYRGGR
GDGRGRGGRG
YGGGGGGGEQ
GRDRGYGGGE
QGRGRGSERG
GGNRGQGRGE
QQDFRSQSQR
GPPPGHGGRG
TTQFQQPRPQ
VAPQPSQAPA
SYAGSVGGVA
GRGAWGRKPQ
VPSDSASPST
STTVVSEPVR
VAEVMNLKPS
VQVATSDRKE
PMKRPDRGGV
VAVRRVNLYV
NHYKVNFNPE
SVIRHYDVEI
KGEIPTKKVS
RFELAMVRDK
VFTDNPDEFP
LAMTAYDGQK
NIFSAVELPT
GSYKVEYPKT
EEMRGRSYTF
TIKQVNVLKL
GDLKEYMTGR
SSFNPRDVLQ
GMDVVMKEHP
SKCMITVGKS
FFTRETEPDE
DFRFGVIAAK
GYRHTLKPTA
QGLSLCLDYS
VLAFRKAMSV
IEYLKLYFNW
SDMRQFRRRD
VEEELIGLKV
TVNHRKNKQK
LTIVGLSMQN
TKDIKFDLID
QEGNEPPRKT
SIVEYFRIKY
GRHIVHKDIP
CLDLGKNGRQ
NFVPMEFCDL
VEGQIYPKDN
LDKDSALWLK
KLSLVNPQQR
QRNIDKMIKA
RNGPSGGEII
GNFGLKVDTN
MTPVEGRVLK
APSLKLAERG
RVVREEPNPR
QNNQWNLMKK
GVTRGSIVKH
WAVLDFTASE
RFNKMPNDFV
DNLIDRCWRL
GMQMEAPIVY
KTSRMETLSN
GNAIEELLRS
VIDEASRKHG
GARPTLVLCA
MSRKDDGYKT
LKWIAETKLG
LVTQCFLTGP
ATKGGDQYRA
NLALKMNAKV
GGSNVELMDT
FSFFKKEDEV
MFIGADVNHP
AARDKMSPSI
VAVVGTLNWP
EANRYAARVI
AQPHRKEEIQ
GFGDACLELV
KAHVQATGKR
PNKIVIFRDG
VSDAQFDMVL
NVELLDVKLT
FEKNGYNPKI
TVIVAQKRHQ
TRFFPATNND
GSDKGNVPSG
TVVDTKVIHP
YEYDFYLCSH
HGGIGTSKPT
HYYTLWDELG
FTSDQVQKLI
FEMCFTFTRC
TKPVSLVPPV
YYADMVAFRG
RMYHEASSRE
KNFKQPRGAS
TSAASLASSL
SSLTIEDKAI
FKLHAELENV
MFFV
________________Given the above incorrect annotations, this may, or may not, be the correct sequence for At1g57680.1 _________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________
MAIRKLLLLLKPIDPYPFLQTEGASLIKNPQVLQYLESRCKVHKNAIKFCQEILSKKPVE
WKPISRNDLSHPIRDVDMVITVGGDGTLLHASHFIDDSVPVLGVNSDPTQAHEVEELSDQ
FDASRSTGHLCAATVENFEQVLDDILFGRVVPAKVSRISLKLNSETLLSHALNDILIAQP
CPAAVSRFSFKIKNKDGASSPKTVNCRSSGLRICTAAGSTAAMQSAGGFVMPMLSRDLQF
MVREPISPGSTASLMHSTFKPDQFMDVNWYSDHGTIYIDGCQVQHSVQLGDTIEISSDAP
VLNVFLSHGISQIRSRY-
Multiple sequence alignment[]
A full-length multiple-sequence alignment (MSA) is available here. This MSA may be visualized by submitting it to a server such as ESPript.
Protein structure[]
A predicted structure for this protein is available here.
References[]
- ↑ This is a test reference.